Tools for Comparative Genomics

Whole Genome Comparative Analysis of the Thellungiella halophila v.1.0 Genome

From this page you can access the results of:

the multiple alignments

• Arabidopsis thaliana (TAIR10), Arabidopsis lyrata v.1.0, Carica papaya, Citrus clementina v.0.9 and Thellungiella halophila v.1.0 genomes.

the pairwise alignments of the

Thellungiella halophila v.1.0 genome produced by the JGI with the following genomes:

• The Rice v.7.0 genome produced by the MSU Rice Genome Annotation Project

• The Poplar v.3.0 genome produced by the JGI

• The Citrus sinensis v.1.0 genome produced by the JGI

• The Soybean v.2.0 genome produced by the JGI

• The Glycine max genome produced by the JGI

• The Wine grape genome produced by the French-Italian Public Consortium for Grapevine Genome Characterization

• The Capsella rubella v.1.0 genome produced by the JGI

• The Mimulus guttatus v.1.0 genome produced by the JGI

• The Mimulus guttatus v.2.0 genome produced by the JGI

• The Aquilegia coerulea v.1.0 genome produced by the JGI

• The Citrus clementina v.1.0 genome produced by the JGI

• The Eucalyptus grandis v.1.0 genome produced by the JGI

• The Brassica rapa v.1.1 genome produced by the Brassica database (BRAD)

• The Gossypium raimondii v.2.0 genome produced by the JGI

• The Theobroma cacao v.1.1 genome produced by the Cacao Genome Project

• The A. halleri v.1.0 genome produced by the JGI

• The C. grandiflora v.1.0 genome produced by the JGI

• The Drummond's rockcress v.1.0 genome produced by the JGI

• The Turnip mustard v.1.0 genome produced by the JGI

Annotation for this genome comes from the JGI.

Methods and references