Tools for Comparative Genomics

Whole Genome Comparative Analysis of the Maize v.4a.53 Genome

From this page you can access the results of:

the multiple alignments

• Rice v.6.0, Maize v.4a.53, Sorghum bicolor v.1.0, Brachypodium distachyon v.1.0 and Setaria italica v.1.0 genomes.

the pairwise alignments of the

Maize v.4a.53 genome produced by the Maize Genome Sequencing Project with the following genomes:

• The Rice v.6.0 genome produced by the MSU Rice Genome Annotation Project

• The Maize v.4a.53 (dupl.) genome produced by the Maize Genome Sequencing Project

• The Arabidopsis thaliana (TAIR10) genome produced by The Arabidopsis Information Resource (TAIR)

• The Poplar v.2.0 genome produced by the JGI

• The Sorghum bicolor v.1.0 genome produced by the JGI

• The Glycine max genome produced by the JGI

• The Wine grape genome produced by the French-Italian Public Consortium for Grapevine Genome Characterization

• The Brachypodium distachyon v.1.0 genome produced by the JGI

• The Cucumis sativus v.1 genome produced by the Cucumber genome project

• The Mimulus guttatus v.1.0 genome produced by the JGI

Annotation for this genome comes from the JGI.

Methods and references