Tools for Comparative Genomics

Whole Genome Comparative Analysis of the Setaria italica v.2.0 Genome

From this page you can access the results of alignments of the Setaria italica v.2.0 genome produced by the JGI with the following genomes:

• The Rice v.6.0 genome produced by the MSU Rice Genome Annotation Project

• The Rice v.7.0 genome produced by the MSU Rice Genome Annotation Project

• The Maize B73 v.2 genome produced by the Maize Genome Sequencing Project

• The Maize AGP v.3.0 genome produced by the Maize Genome Sequencing Project

• The Arabidopsis thaliana (TAIR10) genome produced by The Arabidopsis Information Resource (TAIR)

• The Sorghum bicolor v.1.0 genome produced by the JGI

• The Sorghum bicolor v.2.0 genome produced by the JGI

• The Wine grape genome produced by the French-Italian Public Consortium for Grapevine Genome Characterization

• The Brachypodium distachyon v.1.0 genome produced by the JGI

• The Setaria italica v.2.0 (dupl.) genome produced by the JGI

• The Panicum virgatum v.0.0 genome produced by the JGI

• The Switchgrass v.1.0 genome produced by the JGI

• The Hall's panicgrass v.0.5 genome produced by the JGI

Annotation for this genome comes from the JGI.

Methods and references