gov::lbl::genome::common::features::Gene Class Reference

Inheritance diagram for gov::lbl::genome::common::features::Gene:

[legend]Collaboration diagram for gov::lbl::genome::common::features::Gene:

[legend]List of all members.

Public Member Functions
	Gene (String inChrom, long inStart, long inEnd)
	Gene (long inStart, long inEnd, String inName, String descr, boolean inForward)
	Gene (String inChromosome, long inStart, long inEnd, String inName, String descr, boolean inForward)
String	getGeneName ()
boolean	isForward ()
String	getDescr ()
String	toString ()
String	toString (long offset)

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Detailed Description

Gene represents a specific chromosome coordinate span.

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Constructor & Destructor Documentation

gov::lbl::genome::common::features::Gene::Gene (  long  inStart, long  inEnd, String  inName, String  descr, boolean  inForward )  [inline]

Gene Parameters: inStart  long inEnd  long inName  String descr  String inForward  boolean

gov::lbl::genome::common::features::Gene::Gene (  String  inChromosome, long  inStart, long  inEnd, String  inName, String  descr, boolean  inForward )  [inline]

Gene Parameters: inChromosome  String inStart  long inEnd  long inName  String descr  String inForward  boolean

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Member Function Documentation

String gov::lbl::genome::common::features::Gene::getDescr (   )  [inline]

get Descriprion Returns: String

String gov::lbl::genome::common::features::Gene::getGeneName (   )  [inline]

get Gene Name Returns: String

boolean gov::lbl::genome::common::features::Gene::isForward (   )  [inline]

return true if forward Returns: boolean

String gov::lbl::genome::common::features::Gene::toString (  long  offset  )  [inline]

return XML formatted string Parameters: offset  long Returns: String Reimplemented from gov::lbl::genome::common::features::ChromSegment.

String gov::lbl::genome::common::features::Gene::toString (   )  [inline]

return XML formatted string Returns: String Reimplemented from gov::lbl::genome::common::features::ChromSegment.

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The documentation for this class was generated from the following file:

• /home/teplitski/Projects/vgb2/src/gov/lbl/genome/common/features/Gene.java

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