gov::lbl::genome::common::features::SuperContig Class Reference

Inheritance diagram for gov::lbl::genome::common::features::SuperContig:

[legend]Collaboration diagram for gov::lbl::genome::common::features::SuperContig:

[legend]List of all members.

Public Member Functions
	SuperContig (int inSuperContigNum, String inChromosome, long inStart, long inEnd)
int	getSuperContigNum ()
String	toString ()
String	toString (long offset)

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Detailed Description

SuperContig is a row of data retrieved from one of the chr%_short tables.

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Constructor & Destructor Documentation

gov::lbl::genome::common::features::SuperContig::SuperContig (  int  inSuperContigNum, String  inChromosome, long  inStart, long  inEnd )  [inline]

SuperContig Parameters: inSuperContigNum  int inChromosome  String inStart  long inEnd  long

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Member Function Documentation

int gov::lbl::genome::common::features::SuperContig::getSuperContigNum (   )  [inline]

get SuperContig Number Returns: int

String gov::lbl::genome::common::features::SuperContig::toString (  long  offset  )  [inline]

return XML formatted string Parameters: offset  long Returns: String Reimplemented from gov::lbl::genome::common::features::ChromSegment.

String gov::lbl::genome::common::features::SuperContig::toString (   )  [inline]

return XML formatted string Returns: String Reimplemented from gov::lbl::genome::common::features::ChromSegment.

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The documentation for this class was generated from the following file:

• /home/teplitski/Projects/vgb2/src/gov/lbl/genome/common/features/SuperContig.java

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