Package gov.lbl.genome.common.features

This package contains classes for various intervals on a genome.

See:
Description

Class Summary

ChromPosition	ChromPosition represents a position in a DNA sequence.
ChromSegment	ChromSegment represents a specific chromosome coordinate span.
ChromSegments	Title: ChromSegments
Cns	Cns represents a conserved non-coding region
Contig	A data set contig mapped onto a base genome.
Exon	Exon represents a specific chromosome coordinate span.
Gap	Gap represents a gap in a DNA sequence.
Gene	Gene represents a specific chromosome coordinate span.
PValue	Title: PValue
Repeat	Repeat represents a segment of a DNA sequence that is a repeated portion.
SuperContig	SuperContig is a row of data retrieved from one of the chr%_short tables.
Utr	Utr represents a specific chromosome coordinate span.

Package gov.lbl.genome.common.features Description

This package contains classes for various intervals on a genome.