gov::lbl::genome::common::AbstractCurveModel Class Reference

Inheritance diagram for gov::lbl::genome::common::AbstractCurveModel:

[legend]Collaboration diagram for gov::lbl::genome::common::AbstractCurveModel:

[legend]List of all members.

Public Member Functions
	AbstractCurveModel (TreeMap data)
void	setData (TreeMap data)
TreeMap	getData ()
void	setAnnotations (Vector annotations)
Vector	getAnnotations ()
Point2D	getStartPoint ()
Point2D	getEndPoint ()
Double	getInterval ()
int	getXType ()
int	getYType ()
void	addPoint (Point2D.Float point) throws BadCoordinateTypeException
Iterator	getAllPoints ()
int	getNumberOfPoints ()
void	setCurveInfo (CurveInfo ci)
CurveInfo	getCurveInfo ()
boolean	isDeleted ()
String	getLongName ()
String	getName ()
void	hide ()
void	show ()
boolean	isHidden ()
boolean	equals (Object o)
String	getParameterString (VistaApp vapp)
CurveParameters	getParameters ()
int	getMinX ()
int	getMaxX ()
AbstractCurveModel	cloneCurve () throws CloneNotSupportedException
String	getID ()
Protected Attributes
TreeMap	data = new TreeMap()
Vector	annotations = new Vector()
CurveInfo	curveInfo = null
boolean	hidden = false
int	minX
int	maxX
String	id = null
Static Protected Attributes
final int	X_TYPE = CommonConstants.INTEGER
final int	Y_TYPE = CommonConstants.INTEGER
Package Attributes
Vector	data_values

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Detailed Description

Title: AbstractCurveModel

Description: abstract curve data description

Copyright: Copyright (c) 2002 Ernest Orlando Lawrence Berkeley National Laboratory

Company: LBNL

Author:

Lila Tretikov

Version:

1.0

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Constructor & Destructor Documentation

gov::lbl::genome::common::AbstractCurveModel::AbstractCurveModel (  TreeMap  data  )  [inline]

AbstractCurveModel Parameters: data  TreeMap

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Member Function Documentation

void gov::lbl::genome::common::AbstractCurveModel::addPoint (  Point2D.Float  point  )  throws BadCoordinateTypeException [inline]

add Point Parameters: point  Float Exceptions: BadCoordinateTypeException  Implements gov::lbl::genome::common::CurveModel.

AbstractCurveModel gov::lbl::genome::common::AbstractCurveModel::cloneCurve (   )  throws CloneNotSupportedException [inline]

clone Curve Returns: AbstractCurveModel Exceptions: CloneNotSupportedException

boolean gov::lbl::genome::common::AbstractCurveModel::equals (  Object  o  )  [inline]

compare 2 corve models Parameters: o  Object Returns: boolean

Iterator gov::lbl::genome::common::AbstractCurveModel::getAllPoints (   )  [inline]

Use this method to get all the points in this CurveModel. Returns: Iterator over collection of all Point2D objects in this CurveModel. Implements gov::lbl::genome::common::CurveModel.

Vector gov::lbl::genome::common::AbstractCurveModel::getAnnotations (   )  [inline]

return Annotations Returns: Vector

CurveInfo gov::lbl::genome::common::AbstractCurveModel::getCurveInfo (   )  [inline]

get CurveInfo Returns: CurveInfo

TreeMap gov::lbl::genome::common::AbstractCurveModel::getData (   )  [inline]

return Data points Returns: TreeMap

Point2D gov::lbl::genome::common::AbstractCurveModel::getEndPoint (   )  [inline]

get End Point Returns: Point2D Implements gov::lbl::genome::common::CurveModel.

String gov::lbl::genome::common::AbstractCurveModel::getID (   )  [inline]

get ID Returns: String Reimplemented in gov::lbl::genome::common::CustomCurveModel.

Double gov::lbl::genome::common::AbstractCurveModel::getInterval (   )  [inline]

return Interval between two points Returns: Double Implements gov::lbl::genome::common::CurveModel.

String gov::lbl::genome::common::AbstractCurveModel::getLongName (   )  [inline]

get Long Name Returns: String See also: gov.lbl.genome.common.CurveInfo::getLongName() Implements gov::lbl::genome::common::CurveModel.

int gov::lbl::genome::common::AbstractCurveModel::getMaxX (   )  [inline]

get Max X Returns: int

int gov::lbl::genome::common::AbstractCurveModel::getMinX (   )  [inline]

get Min X Returns: int

String gov::lbl::genome::common::AbstractCurveModel::getName (   )  [inline]

get Name Returns: String See also: gov.lbl.genome.common.CurveInfo::getName() Implements gov::lbl::genome::common::CurveModel.

int gov::lbl::genome::common::AbstractCurveModel::getNumberOfPoints (   )  [inline]

get Number Of Points Returns: int Implements gov::lbl::genome::common::CurveModel.

CurveParameters gov::lbl::genome::common::AbstractCurveModel::getParameters (   )  [inline]

return Curve Parameters Returns: CurveParameters

String gov::lbl::genome::common::AbstractCurveModel::getParameterString (  VistaApp  vapp  )  [inline]

return Parameter String Parameters: vapp  VistaApp Returns: String Implements gov::lbl::genome::common::CurveModel. Reimplemented in gov::lbl::genome::common::VistaCurveModel.

Point2D gov::lbl::genome::common::AbstractCurveModel::getStartPoint (   )  [inline]

get Start Point Returns: Point2D Implements gov::lbl::genome::common::CurveModel.

int gov::lbl::genome::common::AbstractCurveModel::getXType (   )  [inline]

return Type of the X axis Returns: int Implements gov::lbl::genome::common::CurveModel.

int gov::lbl::genome::common::AbstractCurveModel::getYType (   )  [inline]

return Type of the Y axis Returns: int Implements gov::lbl::genome::common::CurveModel.

void gov::lbl::genome::common::AbstractCurveModel::hide (   )  [inline]

hidden = true

boolean gov::lbl::genome::common::AbstractCurveModel::isDeleted (   )  [inline]

return true if curve is deleted Returns: boolean See also: gov.lbl.genome.common.CurveInfo::isDeleted()()

boolean gov::lbl::genome::common::AbstractCurveModel::isHidden (   )  [inline]

return true if the curve is hidden Returns: boolean

void gov::lbl::genome::common::AbstractCurveModel::setAnnotations (  Vector  annotations  )  [inline]

set Annotations Parameters: annotations  Vector

void gov::lbl::genome::common::AbstractCurveModel::setCurveInfo (  CurveInfo  ci  )  [inline]

set CurveInfo Parameters: ci  CurveInfo

void gov::lbl::genome::common::AbstractCurveModel::setData (  TreeMap  data  )  [inline]

set Data points Parameters: data  TreeMap

void gov::lbl::genome::common::AbstractCurveModel::show (   )  [inline]

hidden = false

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The documentation for this class was generated from the following file:

• /home/teplitski/Projects/vgb2/src/gov/lbl/genome/common/AbstractCurveModel.java

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